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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889996.1_cds_XP_016444667.1_39705
CDS Infomation

[gene=LOC107769924] [db_xref=GeneID:107769924] [protein=metalloendoproteinase 1-MMP-like] [protein_id=XP_016444667.1] [location=join(44182..44745,45242..45742)] [gbkey=CDS]
Sequence

ATGTCTTTCTTCTCTTCTTTCTTTCTCCTTGTCTCCTTTCTCTTCTTCTCTCCATGTCTT
TCTACTAGAACATCACCATTTTTTTCCACTAAGCCTATAAACCCCACAAATTATCATAAA
ATCCAAAGTTATACATGGCATGAATTTGGGAAATTTGTGGATGCCACTAGAGGCAACAAA
ATCAATGGGATTTCTGAGCTCAAGAAATATTTTCATCGATTCGGGTACTTGAAGATGGAC
AACTTGAATTTTACTGATTTATTTGATGATCACTTGGAGCATGCCTTGATTAAATATCAA
GAAAAGTTAGGTCTTATAGTCACTGGAAAACTTGATGAAAATACAGTTTCTCAGATTATT
TCACCTAGGTGCGGCGTATCCGATTTTGCCCCTAAATTCATGCATGCAAAGAGACATTAC
GCATTTTTCTCCGGCCGGCCGAGATGGTCACGAAGTATACCGATAATTTTAACGTACGCA
TTCTCGCCGGAGAATGTGATAACTTCTTTGAGCAAGTCGGAGATAAAGGGTGCTTTTCGA
CGTGCTTTTAGCCATTGGGCATCGGTAATACCAGTTACTTTCTCGGAAAGCAACGACTAC
GGATTTGCAGATATCAAAATAGGGTTTTACAAAGGTGATCATGGGGATGGAGAGCCATTT
GATGGAGTTCTTGGTGTTTTAGCTCATGCGTTTTCGCCGGAAACCGGGAGGTTCCACCTT
GATGCCGCGGAGACATGGGCAGTGGACTTTGATAGAGAGAAATCAGATGAGGCTATTGAT
TTAGAATCAGTAGCTACACATGAAATTGGACATTTGTTAGGGCTGGCTCATACTTCAGTT
CAAGAAGCAGTGATGTTCCCTAGTTTAAGACCAAGAGAAAAGAAGGTTGATTTGAAAATG
GATGATATTAAGGGAATTCAAGCTCTTTACGGTTCAAACCCTAATTTTAACGATCAAGCT
CTTTCGGAATCAGATACTTCTATAAACAATGGAGTTGCTTTGAGGAAGAGACCATTTACA
TGGTCTAATTTTATTTTGTTCTTGATCTTGTCGATAGCTATGTAA

Peptide Sequence

PEP ID

XP_016444667.1
PEP Infomation

PREDICTED: metalloendoproteinase 1-MMP-like [Nicotiana tabacum]
Sequence

MSFFSSFFLLVSFLFFSPCLSTRTSPFFSTKPINPTNYHKIQSYTWHEFGKFVDATRGNK
INGISELKKYFHRFGYLKMDNLNFTDLFDDHLEHALIKYQEKLGLIVTGKLDENTVSQII
SPRCGVSDFAPKFMHAKRHYAFFSGRPRWSRSIPIILTYAFSPENVITSLSKSEIKGAFR
RAFSHWASVIPVTFSESNDYGFADIKIGFYKGDHGDGEPFDGVLGVLAHAFSPETGRFHL
DAAETWAVDFDREKSDEAIDLESVATHEIGHLLGLAHTSVQEAVMFPSLRPREKKVDLKM
DDIKGIQALYGSNPNFNDQALSESDTSINNGVALRKRPFTWSNFILFLILSIAM

Transcript Sequence

Gene sequence data has not been registered.